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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015856273.1_cds_XP_016513093.1_25669
CDS Infomation

[gene=LOC107830125] [db_xref=GeneID:107830125] [protein=protein SHOOT GRAVITROPISM 5-like] [protein_id=XP_016513093.1] [location=join(2278..2380,2567..2966,3933..4683)] [gbkey=CDS]
Sequence

ATGTTAAGCATTAATAACCCAAATTCCTCTTCCGACCCTTTCACTTCCTCAGAGAATGGA
AATAATTGTAATAGAAGAAAAAGAAGGCCAGCAGGAACCCCAGATCCAGATGCAGAAGTG
GTATCCCTATCACCAAAAACGTTATTGGAATCAGATCAATACGTATGTGAGATCTGTAAC
CAAGGATTTCAAAGGGACCAAAATTTACAGATGCATAGAAGAAGGCATAAAGTACCATGG
AAATTGCTGAAAAGAGAAACCCCAATAGTTCGAAAGAGAGTTTTTGTGTGTCCAGAACCA
ACTTGTCTACACCATGACCCTTGTCATGCTCTTGGTGATCTTGTTGGTATTAAGAAACAC
TTCAGAAGGAAACACAGTAATCACAAACAATGGGTTTGTGACAAATGCTCAAAAGGCTAT
GCAGTTCAGTCCGATTACAAAGCACATCTCAAAACCTGTGGCACTCGTGGCCATTCTTGT
GATTGTGGCCGCGTCTTCTCTAGGGTGGAGAGCTTCATAGAGCACCAAGATGCCTGTAGC
TTCAGCAGACTCCGATCAGATTCAAAATCTTTACAGCCAACACCTTGCCTTTCTCGGACA
GCTTCAAGTCCCACCCCGTCAAGTGACACTAATCTCACTACAGTTCCATGGCCTAGTTTC
CTTATATCCAATAAGCCAAAAACATTTCTCAAGAATGACGTAAAGCAACACAATTTAGAG
CTCCAGCTCTTGACTACTACAACTACTACTACATCTTTATCTAGCCCCTTTGATATCTCT
GTATCATCTAAACCGAACGATGGTCACTCCACTCATCTTCAACTCTCCATTGGTTCATCC
GATTTCAATGAAAAAAATGACTCAGAAAATGACACGCACAAATCAAGAAATGGTCCAAAT
TTGGATGTTTCATTGACACTTAAAGACGAAGCGCGAGAGCGGTTGAGTCAGGCCATGGCT
GAAAAAGCCTATGCCGAAGAGGCAAGAAAACAAGCCAAGAGACAAATTGAATTGGCCGAG
CAAGAATTCGCCAATGCCAAGAGGATTAGACGACAAGCACAAGGGGAGTTAGAAAAGGCT
CAAGCTTTGAAGGAGCAAGCAATCAGGCAAATTAATTCTACTCTTTCACAAATCACTTGT
CATGTTTGCAAACAACAATTCCAAGCTAAAAGGATAGCAACAACAAGTATAGTTCCTTCT
TATGATATGCGGTTGAGCCATATTTCTTCAGGTTTAACAGAACACAAAATGTAA

Peptide Sequence

PEP ID

XP_016513093.1
PEP Infomation

PREDICTED: protein SHOOT GRAVITROPISM 5-like [Nicotiana tabacum]
Sequence

MLSINNPNSSSDPFTSSENGNNCNRRKRRPAGTPDPDAEVVSLSPKTLLESDQYVCEICN
QGFQRDQNLQMHRRRHKVPWKLLKRETPIVRKRVFVCPEPTCLHHDPCHALGDLVGIKKH
FRRKHSNHKQWVCDKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACS
FSRLRSDSKSLQPTPCLSRTASSPTPSSDTNLTTVPWPSFLISNKPKTFLKNDVKQHNLE
LQLLTTTTTTTSLSSPFDISVSSKPNDGHSTHLQLSIGSSDFNEKNDSENDTHKSRNGPN
LDVSLTLKDEARERLSQAMAEKAYAEEARKQAKRQIELAEQEFANAKRIRRQAQGELEKA
QALKEQAIRQINSTLSQITCHVCKQQFQAKRIATTSIVPSYDMRLSHISSGLTEHKM

Transcript Sequence

Gene sequence data has not been registered.